Sweetpotato Germplasm and Genome Resource Database

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Blast

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Blastn Against Gene

Type of query:

Text

File

Enter FASTA sequences:

e.g., example

Upload FASTA file:

Database:

xushu18 CDS

I.batatasBeauregardConsensus_v1 CDS

I.batatasBeauregardPhased_v1 CDS

I.batatasBeauregardPhased_v4 CDS

I.batatasNewKawogoConsensus_v1 CDS

I.batatasNewKawogoPhased_v3 CDS

I.batatasTanzaniaConsensus_v1 CDS

I.batatasTanzaniaPhased_v3 CDS

evalue:

max_target_seqs:

word_size:

dust:

Processing...

Processing your BLAST request. This may take a few moments...

Blastn Against Genome

Type of query:

Text

File

Enter FASTA sequences:

e.g., example

Upload FASTA file:

Database:

xushu18 Genome

I.batatasBeauregardConsensus_v1 Genome

I.batatasBeauregardPhased_v1 Genome

I.batatasBeauregardPhased_v4 Genome

I.batatasNewKawogoConsensus_v1 Genome

I.batatasNewKawogoPhased_v3 Genome

I.batatasTanzaniaConsensus_v1 Genome

I.batatasTanzaniaPhased_v3 Genome

evalue:

max_target_seqs:

word_size:

dust:

Processing...

Processing your BLAST request. This may take a few moments...

Blastp Against Protein

Type of query:

Text

File

Enter FASTA sequences:

e.g., example

Upload FASTA file:

Database:

xushu18 Protein

I.batatasBeauregardConsensus_v1 Protein

I.batatasBeauregardPhased_v1 Protein

I.batatasBeauregardPhased_v4 Protein

I.batatasNewKawogoConsensus_v1 Protein

I.batatasNewKawogoPhased_v3 Protein

I.batatasTanzaniaConsensus_v1 Protein

I.batatasTanzaniaPhased_v3 Protein

evalue:

max_target_seqs:

word_size:

seg:

Matrix:

Processing...

Processing your BLAST request. This may take a few moments...

Sweetpotato Genomics Resource | Ipomoea Genome Hub | International Potato Center Genebank | SweetPotatoBase

This research was supported by the National Key Research and Development Program of China (2023YFD1202702); China Agriculture Research System (CARS-10-GW06).

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